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Masking pixels which are not connected to minimum amount of other pixels with Python

I have a raster with 1s and 0s. I want to mask all pixels with 1s that are not connected to a minimum amount of 4 other pixels in the x direction and 4 other pixels in the y direction in a rectangular ...
tofri's user avatar
  • 69
2 votes
0 answers
104 views

Replacing values in a raster using a mask in Python

I have a tiff-file with three color bands that I want to mask in Python using a shapefile, but when I use the normal masking method with rasterio, the data points under the mask are replaced with (0,0,...
Marcus K.'s user avatar
  • 201
1 vote
2 answers
567 views

How to mask bands of an image based on values of one of the bands using numpy and gdal

I have a raster with two bands, and I want to mask both bands to get data where band "yod" has a value of 2011 and export a new tif file with the same two bands masked. The following script ...
Isa's user avatar
  • 313
0 votes
1 answer
136 views

How to make multiclass color mask based on polygons (osgeo.gdal python)?

I know how to make binary 1-band mask in python with osgeo.gdal.Rasterize(src, shp_file_name, burnValues=[1]) But what if I have several classes and want to make 3-band mask with different colors for ...
Nikita Artemenko's user avatar
1 vote
1 answer
1k views

Mask NetCDF data in Python with shapefile

Precursor to this question: Masking NetCDF data with a shapefile in that has more than one variable Python. Note: Data files are in the previous question. I am trying to mask my polygon but I don't ...
Julius Bamah's user avatar
1 vote
1 answer
4k views

Clip a GeoTIFF based on a bounding box coordinates using rasterio

I would like to clip a geodaframe based on coordinates. Let's say that I have the following bounding box from a GeoPandas dataframe. The projection is mollweide. gdf.boundary.plot() gdf.total_bounds ...
emax's user avatar
  • 269
0 votes
1 answer
505 views

Output raster of rasterio.mask doesn't match CRS of input [closed]

I'm trying to mask a raster with population data with my area of interest. I reprojected the original population raster according to the AOI's crs, but after masking and writing the new file, the crs ...
Danny's user avatar
  • 35
1 vote
1 answer
1k views

Masking clouds on Landsat8 with Python before NDVI [closed]

I'm new to remote sensing and trying to mask clouds with Python. I'm using the same method in Earth Data Science website (https://www.earthdatascience.org/courses/use-data-open-source-python/...
Hilmi Emre's user avatar
1 vote
0 answers
314 views

Getting Rid of Black Boundaries from Tiff Image using Google Earth Engine

I'm getting a tiff image from earth engine using the code below, but the image I get is rectangular and surrounded by a black box. How can I get rid of the black boundaries on the corners and get a ...
Ege Akkaya's user avatar
0 votes
1 answer
593 views

Clip data while reading file into Python with GeoPandas

Geopandas is able to read in only part of a file using: roi= geopandas.GeoDataFrame(geometry) indexed_data = geopandas.read_file("path-to-file", mask=roi) or geopandas.read_file("path-...
sir_olf's user avatar
  • 81
5 votes
1 answer
1k views

Cloud mask algorithms for Sentinel-2 Level-2A data

I am trying to find the best Sentinel-2 cloud mask algorithm for Level-2A data that can be integrated in a Python script and that works well on oceanic areas. I am working with level-2 data because I ...
Just_4n0th3r_Pr0gr4mm3r's user avatar
2 votes
1 answer
233 views

Rasterio mask washing out result

Using the rio.mask.mask function to clip out a section of an ortho. The result .tif looks like it has been "washed" out. The pixel values from the ortho and the result are exactly the same, ...
Binx's user avatar
  • 1,456
2 votes
3 answers
12k views

Masking with rasterio in Python

Introduction I have a shapefile for my area of interest (which in this case is Tehran) and also a TIF file that contains the categorical information(cloud status). In this case, I want to mask the TIF ...
TheFaultInOurStars's user avatar
2 votes
1 answer
5k views

Rasterio mask doesn't work with shapely polygon

I have raster which I want to mask with shapely polygon.According the rasterio documentation, rasterio.mask can work with shapely geometry.However, in this case, it doesn't work. whenever I use my ...
ReutKeller's user avatar
  • 2,059
1 vote
1 answer
667 views

Masking satellite data using shapefile

I am using Landsat data to determine NDVI for a specific region of interest (roi). However, the roi has buildings and other artificial objects that I wish to mask. I have followed through the example ...
turner__rs's user avatar

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