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@dib-lab @BrendelGroup @bioconda @bioforensics
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  1. kevlar-dev/kevlar

    Reference-free variant discovery in large eukaryotic genomes

    Python 25 7

  2. bioforensics/MicroHapulator

    Software package for simulating and analyzing microhaplotype sequence data

    Python 3

  3. dib-lab/khmer

    In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

    Python 576 290

  4. bioforensics/MicroHapDB

    Data package providing convenient programmatic access to published microhaplotype data.

    Python 1

  5. tag

    Genome annotation data analysis and management implemented in pure Python

    Python 2

  6. BrendelGroup/pdom-genome-project

    Polistes dominula genome project, a collaboration between the Insect Sociogenomics Lab at Iowa State University and the Computational Genome Science Lab at Indiana University

    Makefile 3 2

508 contributions in the last year

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July 2019

Created a pull request in standage/tag that received 1 comment

New collapse function and bcollapse method

This update introduces a collapse_locus function to the bae module, and a corresponding tag bcollapse command to the CLI. Given a stream of loci co…

+206 −3 • 1 comment

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