FNNDSC / BCH

Repositories

• pfcon

  Data / Compute manager
  Python MIT 13 5 10 2 Updated Jul 15, 2020

• mgz2imgslices

  A simple Python utility which converts mgz files to readable formats like PNG/JPEG, separately for each label defined within it.
  Python MIT 0 0 0 0 Updated Jul 15, 2020

• pl-med2img

  A ChRIS DS plugin to convert from medical image data files to display-friendly formats (like png and jpg).
  Python MIT 0 0 0 0 Updated Jul 15, 2020

• pfioh-flask

  Flask Implementation of Pfioh
  Python 0 0 0 0 Updated Jul 15, 2020

• tslide-presentations

  A repo to house/keep tslide presentations.
  0 0 2 0 Updated Jul 14, 2020

• pl-mgz2imgslices

  A ChRIS plugin to convert `mgz` to `png` or `jpeg` which will also be useful in other project workflows
  Python MIT 0 0 1 0 Updated Jul 14, 2020

• pl-mricnn

  A 3D U-Net effective for Brain MRI segmentation
  Python MIT 1 1 0 0 Updated Jul 14, 2020

• pl-mgz_converter

  A plugin to convert mgz files to numpy or png files
  Python MIT 0 0 1 0 Updated Jul 14, 2020

• ChRIS_ultron_backEnd

  Backend for ChRIS

  docker kubernetes django openshift django-rest-framework pipelines python3
  Python MIT 19 16 35 0 Updated Jul 13, 2020

• pfioh

  Path File IO Handler
  Python MIT 17 1 4 2 Updated Jul 9, 2020

• pman

  A process management system written in python
  Python MIT 20 9 15 4 Updated Jul 9, 2020

• pflogf

  Opinionated logging formatter for fnndsc/pf* family, inspired by pfmisc.debug
  Python MIT 0 0 0 0 Updated Jul 4, 2020

• ChRIS_store

  Backend for ChRIS plugin apps store

  docker kubernetes django openshift django-rest-framework pipelines python3
  Python MIT 3 7 1 0 Updated Jul 2, 2020

• cube-design

  All CUBE related designs
  MIT 0 2 11 0 Updated Jul 2, 2020

• fetal

  The fetal atlas explorer based on Slice:Drop.
  CSS 0 1 0 0 Updated Jun 30, 2020

• ChRIS_ui

  UI for ChRIS

  javascript css typescript spa html5 reactjs medical
  TypeScript MIT 9 8 14 0 Updated Jun 30, 2020

• medview

  Standalone web-based medical data viewer
  JavaScript MIT 1 6 0 0 Updated Jun 30, 2020

• med2image

  Converts medical images to more displayable formats, e.g. NIfTI to jpg.
  Python MIT 34 85 23 0 Updated Jun 29, 2020

• cookiecutter-chrisapp

  A cookiecutter template for Chris app plugins

  docker cookiecutter python3
  Python MIT 6 4 2 0 Updated Jun 28, 2020

• ChRIS_store_ui

  UI for the ChRIS Store

  javascript typescript spa html5 css3 reactjs medical
  JavaScript MIT 8 8 14 (1 issue needs help) 4 Updated Jun 28, 2020

• fnndsc

  Mono repo for FNNDSC's Javascript projects.
  JavaScript MIT 3 5 5 4 Updated Jun 28, 2020

• tslide

  Quick-n-dirty python engine and html/css/js machinery to rapidly deploy a set of text files into an html slide show.
  Python MIT 1 0 2 0 Updated Jun 26, 2020

• pl-fshack

  A quick "hack" plugin for freesurfer
  Python 0 0 3 0 Updated Jun 25, 2020

• pl-medcon

  A DS plugin to convert NIfTI to DICOM
  Python MIT 0 0 1 0 Updated Jun 25, 2020

• pl-cni_challenge

  Lots of Outer Space to Explore (and other empty promises)
  TypeScript 2 0 0 1 Updated Jun 23, 2020

• pl-freesurfer_pp

  Pre-populated "dummy" plugin that copies some contained prior FreeSurfer run to output
  Python MIT 2 0 3 0 Updated Jun 16, 2020

• ubuntu-python3

  Source for a slim Ubuntu-based Python3 image
  Dockerfile 12 24 1 0 Updated Jun 9, 2020

• scripts

  Various Scripts
  Shell 3 3 0 0 Updated Jun 9, 2020

• pfurl

  Path-File-URL client.
  Python MIT 9 1 3 1 Updated Jun 9, 2020

• pfmisc

  Misc python modules used by many of the FNNDSC projects
  Python MIT 2 0 0 0 Updated Jun 8, 2020