MMseqs2: ultra fast and sensitive search and clustering suite

Accurate sample inference from amplicon data with single nucleotide resolution

A taxonomic toolbelt for R

Bugcrowd’s baseline priority ratings for common security vulnerabilities

Rinvex Categorizable is a polymorphic Laravel package, for category management. You can categorize any eloquent model with ease, and utilize the power of Nested Sets, and the awesomeness of Sluggable, and Translatable models out of the box.

Taxonomies used in MISP taxonomy system and can be used by other information sharing tool.

GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.

Fast taxonomic classification of metagenomic sequencing reads using a protein reference database

A curated list of amazingly awesome articles, people, projects, applications, software libraries and projects related to the knowledge management space

~ Lightweight, Flexible & Rapid WP Development Framework ~

Python module for average nucleotide identity analyses

Sequana: a set of Snakemake NGS pipelines

OneNote (desktop) add-in to manage OneNote pages by page tags

Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data

A Cross-platform and Efficient NCBI Taxonomy Toolkit

Machine Learning based Intrusion Detection Systems are difficult to evaluate due to a shortage of datasets representing accurately network traffic and their associated threats. In this project we attempt at solving this problem by presenting two taxonomies

🐞 Convert NCBI taxonomy dump into lineages

Contains a list of Popoto.js examples

A taxonomy for open source cryptocurrency, blockchain, and decentralized ecosystems

Simple, nestable Terms & Taxonomies (similar to WordPress) for Laravel 5.

R interface to the fishbase.org database

code for the paper "End-to-End Reinforcement Learning for Automatic Taxonomy Induction" ACL 2018

Example plugin for adding an image upload field to taxonomy terms in WordPress

taxonomic classes for R

Protist Ribosomal Reference database (PR2) - SSU rRNA gene database

The Catalogue of Life

Ebay NodeJS Wrapper

The source code used for self-supervised taxonomy expansion method TaxoExpan, published in WWW 2020

Workbench for biodiversity informatics.

SKOS-Play allows to print SKOS files, and convert them from Excel.