Pachter Lab

Pinned

1. kallisto Public

   Near-optimal RNA-Seq quantification

   C 456 148

2. sleuth Public

   Differential analysis of RNA-Seq

   R 249 83

3. poseidon Public

   poseidon system - open source syringe pumps and microscope for laboratories

   Python 126 41

4. kb_python Public

   A wrapper for the kallisto | bustools workflow for single-cell RNA-seq pre-processing

   Python 67 11

5. kallistobustools Public

   kallisto | bustools workflow for pre-processing single-cell RNA-seq data

   62 20

6. ffq Public

   A command line tool that makes it easier to find sequencing data from the SRA / GEO / ENA.

   Python 140 8