seung-lab
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compressedseg
Forked from janelia-flyem/compressedsegcompressed_segmentation for Neuroglancer volumes. This is the PyPI package fork.
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MicronsBinder
Forked from AllenInstitute/MicronsBinderA collection of notebooks to provide examples of using Microns-explorer.org datasets
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SEAMLeSS
SEAMLeSS (under active development)
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cloud-volume
Read and write Neuroglancer datasets programmatically.
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PyChunkedGraph
Chunked graph structure used for human proof-reading in Python
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chunkflow
Compose chunk operators to create pipeline for distributed computation
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DeepEM
Deep Learning for EM Connectomics
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seuron
Forked from wongwill86/air-tasks -
corgie
Forked from scottwedge/corgie -
cloud-files
Threaded client for AWS S3, Google Cloud Storage (GCS), in-memory, and the local filesystem.
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connected-components-3d
Connected components on multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants.
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dijkstra3d
Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D Image Volumes
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explore-page
Landing page Single Page App for Eyewire
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igneous
Python cloud pipeline for Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Remapping, and more.
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python-task-queue
Threaded task queue with timed leasing of tasks. Implementations for SQS and local filesystem.
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fastremap
Remap, mask, renumber, unique, and in-place transposition of 3D labeled images.
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python-storage
Forked from googleapis/python-storage -
torchfields
A PyTorch add-on for working with image mappings and displacement fields, including Spatial Transformers
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python-crc32c
Forked from googleapis/python-crc32c -
EMAnnotationSchemas
Repository to hold schemas for annotations of volumetric imaging data focused on EM