Cytoscape Consortium

Repositories

• py4cytoscape

  Python library for calling Cytoscape Automation via CyREST

  python workflow cytoscape workflow-automation py2cytoscape cytoscape-interfaces
  Python 4 5 1 0 Updated Oct 3, 2020

• cytoscape.js-cxtmenu

  Context menu for Cytoscape.js

  cytoscapejs cytoscapejs-extension
  JavaScript MIT 66 105 2 2 Updated Oct 3, 2020

• cytoscape-explore
  JavaScript MIT 0 5 16 0 Updated Oct 2, 2020

• file-transfer-app
  Java MIT 0 1 0 0 Updated Oct 1, 2020

• cx-viz-converter
  JavaScript MIT 0 0 0 0 Updated Oct 1, 2020

• cytoscape.github.com

  Cytoscape org web site.
  HTML 15 20 0 1 Updated Oct 1, 2020

• cytoscape-admin-scripts

  Build and maintenance scripts for Cytoscape core developers.
  Jupyter Notebook 2 1 1 0 Updated Sep 30, 2020

• cytoscape-impl

  Cytoscape 3 implementation bundles.
  Java LGPL-2.1 34 27 0 0 Updated Sep 29, 2020

• cytoscape-tutorials

  Collection of modular Cytoscape tutorials for online presentation using reveal.js
  HTML CC0-1.0 87 178 22 (1 issue needs help) 2 Updated Sep 29, 2020

• cytoscape.js-compound-drag-and-drop

  Compound node drag-and-drop UI for adding and removing children
  JavaScript MIT 3 10 0 0 Updated Sep 29, 2020

• cytoscape.js-popper

  A wrapper for Popper.js that lets you position divs relative to Cytoscape elements
  JavaScript MIT 16 40 1 1 Updated Sep 28, 2020

• cytoscape.js

  Graph theory (network) library for visualisation and analysis

  javascript analysis network visualisation graph-theory cytoscapejs
  JavaScript 1,293 6,953 6 0 Updated Sep 28, 2020

• cytoscape-api

  Cytoscape 3 API bundles.
  Java LGPL-2.1 25 17 0 0 Updated Sep 28, 2020

• cytoscape.js-edgehandles

  Edge creation UI extension for Cytoscape.js

  cytoscapejs cytoscapejs-extension
  HTML MIT 65 95 4 3 Updated Sep 28, 2020

• cytoscape.js-cola

  The Cola.js physics simulation layout for Cytoscape.js

  cytoscapejs cytoscapejs-extension
  JavaScript MIT 41 78 0 1 Updated Sep 28, 2020

• cytoscape.js-elk

  The ELK layout algorithm adapter for Cytoscape.js
  JavaScript MIT 13 9 8 9 Updated Sep 25, 2020

• cytoscape.js-klay

  The Klay layout algorithm for Cytoscape.js
  JavaScript MIT 25 38 0 2 Updated Sep 25, 2020

• cytoscape.js-blog

  The Cytoscape.js blog, using Github pages and Jekyll
  JavaScript MIT 49 17 0 2 Updated Sep 21, 2020

• cytoscape-support

  Cytoscape 3 support bundles.
  Java 4 0 0 0 Updated Sep 20, 2020

• cytoscape

  Cytoscape: an open source platform for network analysis and visualization
  Shell 98 324 0 1 Updated Sep 19, 2020

• cytoscape.js-dagre

  The Dagre layout for DAGs and trees for Cytoscape.js

  cytoscapejs cytoscapejs-extension
  JavaScript MIT 59 134 0 0 Updated Sep 15, 2020

• cytoscape-gui-distribution

  Cytoscape 3 desktop version.
  Java 12 12 0 0 Updated Sep 14, 2020

• cytoscape-app-template

  Cytoscape 3 project files for App developers.
  4 1 0 0 Updated Sep 14, 2020

• wineandcheesemap
  JavaScript MIT 31 42 0 4 Updated Sep 10, 2020

• cytoscape.js-cose-bilkent

  The CoSE layout for Cytoscape.js by Bilkent with enhanced compound node placement.

  cytoscapejs cytoscapejs-extension
  HTML MIT 35 82 18 4 Updated Sep 10, 2020

• jupyter-bridge

  Bridge enables Jupyter code on remote server to execute HTTP calls on local PC
  Python MIT 2 1 0 0 Updated Sep 9, 2020

• cx2js

  A CX to Cytoscape JS library
  JavaScript MIT 0 3 18 0 Updated Sep 3, 2020

• search-portal

  Frontend code for the Search Portal.
  JavaScript 3 3 1 1 Updated Aug 30, 2020

• RCy3

  New version of RCy3, redesigned and collaboratively maintained by Cytoscape developer community
  R MIT 14 24 5 (1 issue needs help) 0 Updated Aug 20, 2020

• appstore

  Cytoscape App Store web application code
  Python 11 7 20 0 Updated Aug 7, 2020