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822 followers · 2 following · 57

Highlights

  • Arctic Code Vault Contributor

Organizations

@apache @cloudera @jclouds @bigdatagenomics @HadoopGenomics @lasersonlab @disq-bio @openclimatefix

Pinned

  1. hadoop-book

    Example source code accompanying O'Reilly's "Hadoop: The Definitive Guide" by Tom White

    Makefile 3.1k 2.5k

  2. covid-19-uk-data

    Coronavirus (COVID-19) UK Historical Data

    HTML 161 76

  3. broadinstitute/gatk

    Official code repository for GATK versions 4 and up

    Java 887 366

  4. leveltheplayingfield

    Analysis of school funding in Wales

    R

  5. disq-bio/disq

    A library for manipulating bioinformatics sequencing formats in Apache Spark

    Java 29 10

  6. theislab/scanpy

    Single-Cell Analysis in Python. Scales to >1M cells.

    Python 717 262

2,472 contributions in the last year

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Contribution activity

September 2020

Created a pull request in pystatgen/sgkit-vcf that received 7 comments

Allow use of cloud stores for intermediate zarr files

Fixes #7

+212 −22 • 7 comments

Created an issue in dask/dask that received 10 comments

map_overlap fails if last chunk is smaller than depth

What happened: dask.array.map_overlap throws a ValueError if the last chunk is smaller than the depth parameter. (The size of the last chunk is nor…

10 comments

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