Pinned

1. OpenGene/fastp Public

   An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

   C++ 1.3k 268

2. OpenGene/MutScan Public

   Detect and visualize target mutations by scanning FastQ files directly

   C 134 38

3. OpenGene/GeneFuse Public

   Gene fusion detection and visualization

   C 89 54

4. OpenGene/gencore Public

   Generate duplex/single consensus reads to reduce sequencing noises and remove duplications

   C++ 93 31

5. OpenGene/repaq Public

   A fast lossless FASTQ compressor with ultra-high compression ratio

   C 95 17

6. OpenGene/VisualMSI Public

   Detect and visualize microsatellite instability(MSI) from NGS data

   C++ 29 12