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  • Technical University of Munich
  • Freising, Germany

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Arctic Code Vault Contributor

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  1. vcf2phylip Public

    Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis

    Python 163 69

  2. paralog-finder Public

    Detects and blacklists paralog RAD loci analyzed in Stacks or ipyrad, based on the McKinney 2017 method (doi:10.1111/1755-0998.12613)

    Python 10 1

  3. fineRADstructure-tools Public

    Tools for data conversion and results visualization for fineRADstructure (http://cichlid.gurdon.cam.ac.uk/fineRADstructure.html)

    Python 7 2

  4. sam2consensus Public

    Get the consensus sequences from SAM (and BAM) files, ignoring the reference

    Python 7 2

126 contributions in the last year

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Contribution activity

April 2022

Created 4 commits in 1 repository

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