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Highlights

  • Arctic Code Vault Contributor

Organizations

@cambiotraining @iSEE
LTLA/README.md

My typical day

GitHub statistics

Aaron's GitHub languages

Aaron's GitHub stats

Bioconductor contributions

As maintainer

Package BioC-devel BioC-release
csaw
diffHic
InteractionSet
scran
beachmat
DropletUtils
cydar
batchelor
BiocNeighbors
BiocSingular
SingleR
simpleSingleCell
chipseqDB
csawUsersGuide
chipseqDBData
basilisk
basilisk.utils
scuttle
celldex
bluster
rebook
scRNAseq
DropletTestFiles
ResidualMatrix
TileDBArray
metapod
mumosa
OSCA

As co-maintainer

Package BioC-devel BioC-release
edgeR
scater
SingleCellExperiment
iSEE
iSEEu
TSCAN

Other packages I'm involved in

Package BioC-devel BioC-release
TENxBrainData
scDblFinder
zellkonverter
velociraptor
snifter
PCAtools

Popular repositories

  1. SingleR

    Clone of the Bioconductor repository for the SingleR package.

    R 58 13

  2. SingleCellThoughts

    Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.

    TeX 30 5

  3. basilisk

    Clone of the Bioconductor repository for the basilisk package.

    R 16 6

  4. archive-beachmat Archived

    An archived version of the beachmat repository, see https://github.com/LTLA/beachmat for the active version.

    C++ 8

  5. batchelor

    Clone of the Bioconductor repository for the batchelor package.

    R 8 6

  6. scRNAseq

    Clone of the Bioconductor repository for the scRNAseq package.

    R 8 6

3,846 contributions in the last year

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Contribution activity

December 2020

Created 117 commits in 25 repositories
Created 2 repositories

Created a pull request in eddelbuettel/rcppannoy that received 7 comments

Added function to report Annoy library version.

As briefly mentioned in jlmelville/uwot#69. We can do: library(RcppAnnoy) version() ## major minor patch devel ## 0 0 17 2 The motivation: BiocNe…

+65 −1 • 7 comments
Opened 10 other pull requests in 8 repositories
Reviewed 1 pull request in 1 repository

Created an issue in Bioconductor/Contributions that received 14 comments

BumpyMatrix

Update the following URL to point to the GitHub repository of the package you wish to submit to Bioconductor Repository: https://github.com/LTLA/B…

9 of 9 • 14 comments
Opened 18 other issues in 13 repositories
waldronlab/MultiAssayExperiment
2 open 1 closed
Bioconductor/Contributions
1 open 1 closed
Bioconductor/BiocManager
2 open
Bioconductor/OrchestratingSingleCellAnalysis
2 open
grimbough/rhdf5
1 open
Bioconductor/BiocFileCache
1 open
Bioconductor/IRanges
1 closed
Bioconductor/Biostrings
1 open
Bioconductor/ShortRead
1 closed
federicomarini/HCAData
1 open
kasperdanielhansen/TENxPBMCData
1 open
Bioconductor/SQLDataFrame
1 open
Bioconductor/DelayedArray
1 closed
Started 1 discussion in 1 repository
waldronlab/MultiAssayExperiment

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