vcf-files

Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis

Rare variant test software for next generation sequencing data

Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data

Learning the Variant Call Format

A python parser to simplify and build the VCF (Variant Call Format).

Powerful statistics for VCF files

A phenotype-based tool for variant prioritization in WES and WGS data

Intersect multiple VCF files with haplotype awareness

Spark VCF data source implementation for Dataframes

Collection of simple C scripts for parsing vcf or bam files using the htslib C library. These scripts can be used as the starting point for more complex scripts

Read and write VCF and BCF files

Evolutionary Bioinformatics Toolkit (EBT)

CNV analysis based on the depth of coverage of Illumina data

VCF file synthesiser with random variants

vCard version 4.0 javascript library for creating or parsing vCards, with full implementation of RFC 6350

vcf file reader

Variant annotation and filtration server ALAPY Genome Explorer

Reverse Name and Lastname Position in a .VCF File.

This Utility software converts VCF files into CSV format as an Excel sheet.

Accelerate the generation of personalized proteomes from a Variant calling format (VCF) file and a reference proteome using graphical processing units (GPUs).

🗃 VCF file converter fixing non-standard VCF files

This app permits to remove all images from a vcf file

Converts phonebook Fritzbox between .xml <=> .csv or .vcf (webapp)

Java VCF Format Reader and Writer

Collection of several small tools. These tools stay here temporarily and may move to other major repositories as they evolve.

High-throughput Tabular Data Processor (HTDP)

VCF: Variant Call Format files are difficult to understand at first, I already had to dive into them in order to learn how to edit them, so you can use my scripts. Some of these functions already exist in vcftools, but it seems it stopped being updated. so you can use these scripts to do various tasks with them

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