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  • University of Utrecht
  • Utrecht, Netherlands
  • @brent_p

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@kortschak

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@quinlan-lab
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Pinned

  1. variant expressions, annotation, and filtering for great good.

    Nim 130 11

  2. fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

    Nim 409 72

  3. goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary

    Go 181 22

  4. nim wrapper for htslib for parsing genomics data files

    Nim 134 20

  5. annotate a VCF with other VCFs/BEDs/tabixed files

    Go 266 49

  6. fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"

    Nim 142 19

801 contributions in the last year

Jul Aug Sep Oct Nov Dec Jan Feb Mar Apr May Jun Mon Wed Fri

Contribution activity

July 2021

Reviewed 1 pull request in 1 repository

Created an issue in mkirsche/Jasmine that received 4 comments

documentation help

Hi, thanks for developing this tool. I have several issues which I think may just be documentation issues: It seems the tool does not accept (b)g…

4 comments

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