#
gbs
Here are 26 public repositories matching this topic...
RADseq Data Exploration, Manipulation and Visualization using R
visualization
genomics
genetics
filter
outliers
imputation
missingness
gbs
normalization
radseq
radseq-data
genomic-data-analysis
genotype-likelihoods
genomics-visualization
genotyping-by-sequencing
batch-effects
heterozygosity
artifacts-detection
paralogs
outliers-detection
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Updated
Jun 16, 2021 - R
stackr: an R package to run stacks software pipeline
genomics
genetics
filter
rad
gbs
radseq
radseq-data
genomic-data-analysis
genotype-likelihoods
genomics-visualization
genotyping-by-sequencing
stackr
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Updated
Nov 5, 2020 - R
Population assignment analysis using R
genomics
assignment
datascience
gbs
radseq
assignment-analysis
radseq-data
fst
genotyping-by-sequencing
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Updated
Oct 26, 2020 - R
Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution. 2018;9:439–446.
machine-learning
r
cross-validation
data-integration
population-genomics
gbs
radseq
population-assignment
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Updated
Aug 17, 2021 - R
Small .gbs chiptune player for Linux
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Updated
Mar 22, 2021 - C
Android Weather Forecast App implemented in MVP Architecture using Kotlin
kotlin
settings
internet-connection
retrofit
picasso
themes
mvp-architecture
weather-forecast
weather-app
gbs
location-tracker
multitheme
kotlin-android-tutorial
daily-weather
gbs-control
koltin-android
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Jan 13, 2021 - Kotlin
gbs is a c++ header library to build and manage NURBS, some optional module are used for visualization and export. This library is compatible with OpenCASACADE and has a python biding.
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Aug 2, 2021 - C++
Tools for data conversion and results visualization for fineRADstructure (http://cichlid.gurdon.cam.ac.uk/fineRADstructure.html)
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Updated
Mar 24, 2020 - Python
GBS 8200 Controller / I2C Configuration reader/writer based on Arduino/ATMega with some nice debug functions, presets and widescreen-support.
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Updated
Aug 2, 2021 - C++
grur: an R package tailored for RADseq data imputations
machine-learning
genomics
random-forest
pca-analysis
imputation
missing-data
boosting-algorithms
gbs
radseq
radseq-data
genomic-data-analysis
genomics-visualization
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Oct 21, 2020 - R
GBS workflow using dDocent. This was designed to process GBS data from SEACONNECT project.
bioinformatics
snakemake
stack
genomics
singularity
vcf
snp
variant-calling
population-genetics
fastq
gbs
radseq
demultiplexing
genotyping
ddocent
singularity-recipe
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Aug 20, 2019 - Shell
A set of job submission scripts to run STACKS (http://catchenlab.life.illinois.edu/stacks/) on a computer cluster with TORQUE/MAUI scheduler. All the files were used to generate GBS data analyses published on the manuscript
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Oct 25, 2017 - Shell
Small .gbs chiptune player for Linux and Windows
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Updated
Sep 24, 2020 - C
Code used for a RADseq/GBS (or, more generally, reduced representation sequencing) optimization pilot experiment with several Antarctic animal species.
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Jun 30, 2021 - R
Java toolkit for multi-threaded preprocessing of extremely large .fastq files in the GBS Pipeline by demultiplexing, filtering, and trimming sequenced DNA.
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Dec 6, 2018 - Java
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