Repositories
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pathling
Turn your FHIR data set into a powerful API that can be used to develop analytics applications and augment data science workflow.
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isling
A tool for detection of viral integrations
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open-pedigree
Forked from phenotips/open-pedigreeA free and open-source pedigree tool by PhenoTips®
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terraform-aws-serverless-beacon
Implementation of Beacon in a serverless (FaaS) manner, to enable cheaper and more versatile (e.g. over distributed ) queries
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INSIDER
Detecting foreign inserted DNA segments in the genome
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redmatch
A rules-based transformation engine that allows exporting data in REDCap as FHIR resources.
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fhir-tx-transforms
Transformations of various code systems to FHIR.
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semantic-search
A deep learning based approach for semantic search over large clinical terminology system
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fhir-owl
Transforms OWL ontologies into FHIR code systems.
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Atlas
Forked from OHDSI/AtlasATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data
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WebAPI
Forked from OHDSI/WebAPIOHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications
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fhir-claml
Transforms ClaML classifications into FHIR code systems.
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fhir-hgnc
Transforms HGNC source files into FHIR code systems.
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openmrs-module-terminologysearch
A module for OpenMRS to search a FHIR terminology server for concepts.
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genclipr-fhir-ig
FHIR implementation guide for the Genomics Clinical Picture Repository standard developed as part of the Standardised Clinical Phenotypes project in Australian Genomics.
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release-validation-framework
Forked from IHTSDO/release-validation-frameworkAPI for testing a SNOMED CT release as part of the release process.
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ontoserver-deploy
Sample deployment project for Ontoserver
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redcap_simple_ontology_provider
REDCap external module provides simple implementation of the ontology provider mechanism.
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VariantSpark
machine learning for genomic variants
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labcodeset-fhir-transform
Application which transforms Nederlandse Labcodeset from its native XML file format to a collection of FHIR terminology resources.
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fhircap Archived
FHIRCap is a tool designed to transform REDCap forms into FHIR resources.
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node-generate-release
Forked from mrkmg/node-generate-releaseGenerate a release for a project following semver using nodejs and gitflow
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observatory
Forked from dylang/observatoryBeautiful UI for showing tasks running on the command line.
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Mirorr
Mirorr: Multimodal Image Registration using blOck-matching and Robust Regression
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redcap_pedigree_editor
Redcap External Module to allow the entry of a pedigree diagram, storing the result as a FHIR resource
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ontology-core
Internal model to represent ontologies and utilities to import ontologies from different formats.