Vallender Lab

Data and software created and/or published by the Vallender Lab

MicrobiomeR
A comprehensive R package for microbiome analysis.

R 13 MIT 1 15 0 Updated Aug 10, 2020
mgap

Python 0 MIT 0 1 0 Updated Jul 6, 2020
protocols
A repository for the protocols and guides used in Dr. Eric Vallender's lab.

TeX 0 2 27 0 Updated Jun 22, 2020
test-repo

0 0 0 0 Updated Mar 23, 2020
fastStructure
A variational framework for inferring population structure from SNP genotype data.

Python 0 MIT 39 0 0 Updated Jan 7, 2020
metadata-templates

0 0 0 0 Updated Sep 4, 2019
onboarding
Helpful documents and resources to get started in the Vallender Lab.

0 0 0 0 Updated Aug 27, 2019
rnaseq-tuxedo-suite
An RNASeq snakemake workflow using the Tuxedo suite.

Python 0 MIT 0 0 0 Updated Aug 19, 2019
dnaseq-gatk-variant-calling
A DNA sequencing pipeline based on the GATK best-practices workflow.

Python 0 MIT 0 0 0 Updated Jul 25, 2019
cookiecutter-snakemake-workflow
A cookiecutter for snakemake workflows.

Python 0 MIT 0 0 0 Updated May 2, 2019

Popular repositories