Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊
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Sep 19, 2021 - Common Workflow Language
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commonwl
CWL documents describe workflows made of command line data analysis tools in a portable, reproducible, and reusable fashion.
Here are 19 public repositories matching this topic...
Python package to extend Airflow functionality with CWL1.1 support
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Oct 15, 2021 - Python
[Experimental] Workflow Definition Language (WDL) to CWL
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Jul 2, 2020 - Python
mr-c
commented
Jul 12, 2019
Either via Python libraries, or handing off to 3rd party tools
- DOI to bibtex
- conda & Debian package name to bibtex
- bio.tools identifier to bibtex
- RRID to bibtext
A workflow engine for CWL which aims to have a pluggable architecture
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May 19, 2021 - Ruby
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dinithiW
commented
Aug 24, 2021
Currently, the WDL specific compund type Map[] is not handled by the translator. (https://github.com/openwdl/wdl/blob/main/versions/1.1/SPEC.md#mapp-y)
A workflow using Maps is given in this workflow (https://github.com/biowdl/tasks/blob/bc1bacf11498d2d30b85591cfccdcf71ef0966a5/star.wdl#L144)
A template to write CWL documents with VSCode with remote container extension
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Sep 22, 2021 - Dockerfile
A visualizer of workflow execution records for CWL
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Apr 19, 2021 - HTML
Simple CWL document generator from given execution commands
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Feb 3, 2020 - D
A Language Server for CWL
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Jul 2, 2020 - Python
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Jul 2, 2020
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Jun 12, 2020 - Common Workflow Language
Created by Peter Amstutz, John Chilton, Michael R. Crusoe, Nebojša Tijanić, and the CWL Community
Released January 2015
- Organization
- common-workflow-language
- Website
- www.commonwl.org
- Wikipedia
- Wikipedia
And link to https://github.com/common-workflow-language/cwl-utils#pull-the-all-referenced-software-container-images