openCOBRA

Community driven constraint-based reconstruction, analysis and modelling of biology

cobratoolbox Public
The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:

MATLAB 175 GPL-3.0 263 73 (1 issue needs help) 1 Updated Jan 31, 2022
cobrapy Public
COBRApy is a package for constraint-based modeling of metabolic networks.

Python 313 GPL-2.0 186 84 (5 issues need help) 7 Updated Jan 24, 2022
cobrapy-website Public

HTML 0 LGPL-3.0 4 0 1 Updated Jan 24, 2022
Medusa Public
Analysis of ensembles of metabolic network reconstructions

Python 16 MIT 7 25 7 Updated Jan 21, 2022
COBRA.papers Public
Repository for scripts related to reproducing the results of an individual publication

MATLAB 6 5 0 0 Updated Jan 18, 2022
COBRA.tutorials Public
Repository of tutorials for The COBRA Toolbox

MATLAB 12 34 6 0 Updated Jan 12, 2022
COBRA.jl Public
High-level, high-performance, constraint-based reconstruction and analysis in Julia

Julia 50 GPL-3.0 34 7 (1 issue needs help) 0 Updated Jan 11, 2022
COBRA.binary Public
Linux, Windows and Mac binaries maintained by the constraint-based reconstruction and analysis community

MATLAB 1 6 1 0 Updated Dec 17, 2021
ctf Public
Chemical table files for constraint-based modelling

0 GPL-3.0 3 1 0 Updated Dec 14, 2021
cookiecutter-python-package Public
Extensive cookiecutter template for openCOBRA Python packages.

Python 2 Apache-2.0 0 0 0 Updated Oct 16, 2021

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