Skip to content
@Rostlab

Rostlab

Pinned

  1. predictprotein-docker Public

    Based off of the official Rostlab & PredictProtein website installation, as of 2020-09-07, the produced Docker image from this repository will result in a fully functioning predictprotein suite, in…

    Dockerfile 5 4

  2. bio_embeddings Public

    Repository containing bio_embeddings resources

  3. SeqVec Public

    Forked from mheinzinger/SeqVec

    Modelling the Language of Life - Deep Learning Protein Sequences

    Python 68 9

  4. nalaf Public

    NLP framework in python for entity recognition and relationship extraction

    Python 103 25

  5. ProNA2020 Public

    ProNA2020: System predicting protein-DNA, protein-RNA and protein-protein binding sites from sequence

    Python 8 3

  6. TMSEG Public

    Forked from BernhoferM/TMSEG2

    Transmembrane Proteins Predictor

    Roff 4 1

Repositories

  • VESPA Public
    Python 1 AGPL-3.0 1 0 0 Updated Jan 24, 2022
  • EAT Public

    Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer annotations from a set of labeled lookup protein embeddings to query protein embedding.

    Python 6 GPL-3.0 0 0 0 Updated Jan 10, 2022
  • nala Public

    Text mining of natural language mutations mentions

    HTML 6 4 15 0 Updated Nov 26, 2021
  • nalaf Public

    NLP framework in python for entity recognition and relationship extraction

    Python 103 Apache-2.0 25 19 1 Updated Nov 9, 2021
  • bindPredict Public

    Prediction of binding residues for metal ions, nucleic acids, and small molecules.

    Python 5 2 0 0 Updated Nov 2, 2021
  • goPredSim Public
    Python 12 MIT 2 0 0 Updated Oct 18, 2021
  • LocText Public

    Relation Extraction (RE) of: Proteins <--> Cell Compartments

    HTML 4 Apache-2.0 2 6 3 Updated Sep 29, 2021
  • predictprotein-docker Public

    Based off of the official Rostlab & PredictProtein website installation, as of 2020-09-07, the produced Docker image from this repository will result in a fully functioning predictprotein suite, including all of its required methods. Databases are not included.

    Dockerfile 5 AFL-3.0 4 2 0 Updated Jul 14, 2021
  • LocNuclei Public

    Prediction of subnuclear locations

    Python 2 1 1 0 Updated Jul 8, 2021
  • TMSEG Public

    Transmembrane Proteins Predictor

    Roff 4 GPL-3.0 2 1 0 Updated May 20, 2021
View all repositories

Most used topics

Loading…