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(to-infinity-and-beyond!)
:octocat:
(to-infinity-and-beyond!)
116 followers · 329 following · 546

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Arctic Code Vault Contributor

Achievements

Arctic Code Vault Contributor

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  • Pro
  • 4 discussions answered

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@NixOS @cljsjs @alda-lang @conda-forge @bioconda @Linguistics-DTU @power-scripting @nf-core @bioinformatics-lab @seqeralabs @bactopia @datascience-playground @biosharp-dotnet @nf-modules @labbact-sabac-iec @mtb-bioinformatics
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abhi18av/README.md

Hello there 👋

My name is Abhinav Sharma, I am a Data Scientist who enjoys working with Bioinformatics. I enjoy helping people and simplifying their life using programming. My history with StartUps gave me experience with Computational Workflows on Cloud/HPC, DevOps, QA and leading SAAS product development.

Profile views in 2021

Abhinav's GitHub stats

Some of my favourite tools

Highlights

Here's brief list of my public or open source work, containing the PRs and initiatives which I consider to be noteworthy as of mid-2020.

Scientific collaborations, DataScience - AI - ML, CLI tools, ReactJS ecosystem and Misc

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  1. seqeralabs/gatk4-germline-snps-indels Public

    Workflow for germline short variant discovery using GATK4

    Nextflow 6 2

  2. ctmrbio/BACTpipe Public

    BACTpipe: An assembly and annotation pipeline for bacterial genomics

    Groovy 16 7

  3. bactopia/bactopia Public

    A flexible pipeline for complete analysis of bacterial genomes

    HTML 110 24

  4. mtb-bioinformatics/mtbseq-nf Public

    MTBSeq made simple and easy using Nextflow.

    Nextflow 2

  5. abhi18av.com Public

    My personal website and blog

    JavaScript

  6. CertificationsAndCourses Public

    This repo is home to all the certifications I've completed till date.

    1

2,324 contributions in the last year

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Contribution activity

November 2021

Created 8 commits in 4 repositories
Created 3 repositories

Created a pull request in fmalmeida/bacannot that received 7 comments

Split out the config profiles

This PR addresses the discussion done in #37

+74 −63 • 7 comments
Opened 9 other pull requests in 5 repositories
nextflow-io/nextflow 2 open 1 closed
abhi18av/nextflow 2 merged
seqeralabs/nf-tower-docs 2 open
BioContainers/multi-package-containers 1 open
seqeralabs/tower-cli 1 merged
Reviewed 5 pull requests in 4 repositories
nextflow-io/nextflow 2 pull requests
seqeralabs/nf-tower-docs 1 pull request
BioContainers/multi-package-containers 1 pull request
fmalmeida/bacannot 1 pull request

Created an issue in fmalmeida/bacannot that received 10 comments

Use of named outputs in processes

Hey Felipe, Building upon the stylistic change suggested in #38 Perhaps instead of using the prokka.out[1] etc, we can rely upon named outputs ann…

10 comments
Opened 8 other issues in 3 repositories
122 contributions in private repositories Nov 1 – Nov 27
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