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@mahmoodlab

Mahmood Lab @ Harvard/BWH

AI for Pathology Image Analysis Lab @ HMS / BWH

Pinned

  1. CLAM Public

    Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering

    Python 305 137

  2. TOAD Public

    AI-based pathology predicts origins for cancers of unknown primary - Nature

    Python 113 29

  3. CRANE Public

    Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine

    Python 7 3

  4. PathomicFusion Public

    Fusing Histology and Genomics via Deep Learning - IEEE TMI

    Jupyter Notebook 122 39

  5. HistoFL Public

    Federated Learning for Computational Pathology - Medical Image Analysis

    Python 17 4

  6. PORPOISE Public

    Pan-Cancer Integrative Histology-Genomic Analysis via Interpretable Multimodal Deep Learning

    Python 26 3

Repositories

  • CLAM Public

    Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering

    Python 305 GPL-3.0 137 3 0 Updated Mar 20, 2022
  • CRANE Public

    Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine

    Python 7 GPL-3.0 3 0 0 Updated Mar 19, 2022
  • Patch-GCN Public

    Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021

    Python 38 GPL-3.0 12 1 0 Updated Mar 11, 2022
  • MCAT Public

    Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images - ICCV 2021

    Jupyter Notebook 31 GPL-3.0 7 1 0 Updated Mar 11, 2022
  • PORPOISE Public

    Pan-Cancer Integrative Histology-Genomic Analysis via Interpretable Multimodal Deep Learning

    Python 26 GPL-3.0 3 1 0 Updated Mar 11, 2022
  • EmbeddedAI-Scope Public

    A 3D Printed Embedded AI-based Microscope for Pathology Diagnosis

    Jupyter Notebook 0 GPL-3.0 1 0 0 Updated Mar 9, 2022
  • PathomicFusion Public

    Fusing Histology and Genomics via Deep Learning - IEEE TMI

    Jupyter Notebook 122 GPL-3.0 39 0 1 Updated Mar 4, 2022
  • HistoFL Public

    Federated Learning for Computational Pathology - Medical Image Analysis

    Python 17 4 0 1 Updated Feb 9, 2022
  • FAIRY Public

    Fast and Scalable Image Search for Histology

    Python 15 GPL-3.0 3 0 0 Updated Jan 4, 2022
  • TOAD Public

    AI-based pathology predicts origins for cancers of unknown primary - Nature

    Python 113 AGPL-3.0 29 1 0 Updated Nov 1, 2021
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