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@Victorian-Bioinformatics-Consortium @pha4ge
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Pinned

  1. prokka Public

    Rapid prokaryotic genome annotation

    Perl 533 180

  2. snippy Public

    ✂️ Rapid haploid variant calling and core genome alignment

    Perl 289 85

  3. shovill Public

    �?️ Assemble bacterial isolate genomes from Illumina paired-end reads

    Perl 145 32

  4. abricate Public

    🔎 💊 Mass screening of contigs for antimicrobial and virulence genes

    Perl 193 51

  5. 💾 📃 "Reads to report" for public health and clinical microbiology

    Perl 94 35

  6. mlst Public

    🆔 Scan contig files against PubMLST typing schemes

    Perl 109 33

188 contributions in the last year

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Contribution activity

January 2022

tseemann has no activity yet for this period.

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