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  1. tximport Public

    Import and summarize transcript-level estimates for gene-level analysis

    R 112 31

  2. tximeta Public

    Transcript Quantification Import with Automatic Metadata

    R 58 11

  3. DESeq2 Public

    Differential gene expression analysis based on the negative binomial distribution

    R 193 68

  4. RNA-seq workflow: gene-level exploratory analysis and differential expression

    47 34

  5. RNA-seq workflow for differential transcript usage following Salmon quantification

    R 13 9

  6. Bioconductor cheat sheet

    R 170 63

1,129 contributions in the last year

Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Dec Jan Mon Wed Fri

Contribution activity

January 2022

Created an issue in mcvickerlab/WASP2 that received 9 comments

Testing allelic analysis

Aaron, Thanks for sharing the new version for testing allelic imbalance. I'm starting to try to port over our WASP AI testing to WASP2. I thought I…

9 comments
Opened 1 other issue in 1 repository
COMBINE-lab/terminus 1 open
12 contributions in private repositories Jan 4 – Jan 28

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