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89 public repositories
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We are building an open database of COVID-19 cases with chest X-ray or CT images.
Updated
Oct 14, 2021
Jupyter Notebook
COVID-CT-Dataset: A CT Scan Dataset about COVID-19
Updated
Jan 26, 2021
Jupyter Notebook
Medical image processing in Python
Updated
May 1, 2020
Python
RadIO is a library for data science research of computed tomography imaging
Updated
Jan 21, 2022
Jupyter Notebook
Updated
Feb 11, 2019
Jupyter Notebook
Sharpness-aware Low Dose CT Denoising Using Conditional Generative Adversarial Network
Software to generate 2D/3D/4D analytical phantoms and their Radon transforms (parallel beam) for image processing
Learned Primal-Dual Reconstruction
Updated
Jun 23, 2019
Python
Segment Source Distribution
Updated
Sep 15, 2021
MATLAB
Open-source MATLAB/GNU Octave Emission and Transmission Tomography Software
Updated
Jan 31, 2022
MATLAB
Low-dose CT via Transfer Learning from a 2D Trained Network, In IEEE TMI 2018
Updated
Feb 17, 2019
Python
Computed Tomography Image Reconstruction Project using MATLAB
Updated
Sep 6, 2019
MATLAB
[MICCAI'2020 PRIME] Uniformizing Techniques to Process CT scans with 3D CNNs for Tuberculosis Severity Estimation.
Updated
Feb 6, 2021
Jupyter Notebook
A 3D Viewer for CTs of Polychromed Wood Sculptures
Segmentation and Identification of Vertebrae in CT Scans using CNN, k-means Clustering and k-NN
Updated
Oct 12, 2021
Python
General deep learning-based fast image registration framework for clinical thoracic 4D CT data
Updated
Dec 13, 2018
Python
CT image reconstruction using Fan-beam Filtered back-projection with Parker and Differential weighting.
Updated
Jul 31, 2019
MATLAB
CTSegNet is an end-to-end 3D segmentation package for large X-ray tomographic datasets using 2D fully convolutional neural networks (fCNN).
Updated
May 16, 2021
Jupyter Notebook
Physics-based data augmentation library for quantifying CT and CBCT images in radiotherapy [PMB'21, Medical Physics'21, AAPM'21]
Updated
Mar 18, 2022
Python
Code for COVID19 CT labeling. Submillimetric CT dataset provided as well.
Updated
Feb 16, 2021
Python
Updated
Jun 26, 2019
MATLAB
Deep Negative Volume Segmentation - automated 3D CT segmentation of body joints for dentistry
Updated
Dec 13, 2021
Python
Whole Body Positron Emission Tomography Attenuation Correction Map Synthesizing using 3D Deep Networks
Updated
Apr 19, 2021
Python
Matlab toolbox for polyenergetic quantitative (polyquant) X-ray CT reconstruction with demos.
Updated
Jun 3, 2019
MATLAB
A tool to develop sparse view CT reconstruction algorithms. It offers an interface to develop methods and quickly compare it with baseline methods.
Updated
Mar 10, 2022
Python
A module for the Insight Toolkit (ITK) that provides a generic, modular, and extensible architecture for lesion sizing algorithms in medical images as well as a reference algorithm for lung solid lesion segmentation in CT images.
Window-Level is a Strong Denoising Surrogate (MICCAI MLMI 2021)
Updated
Jan 19, 2022
Jupyter Notebook
3D VQ-VAE-2 for high-resolution CT scan synthesis
Updated
Jan 11, 2022
Python
C++ implementation of oral cancer detection on CT images
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Feature request based on an original suggestion from @sjh26
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On windows, a CLI executable started through
vtkSlicerCLIModuleLogic::ApplyTasksystematically hides any windows. See code here and