gnomad

Here are 8 public repositories matching this topic...

ding-lab / CharGer

Characterization of Germline variants

bioinformatics annotations clinical variants characterization pathogenicity clinvar vep diseases pathogenic-variants germline-variants exac acmg gnomad

Updated Mar 15, 2022
Python

broadinstitute / gnomad-browser

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Explore gnomAD datasets on the web

javascript genomics gnomad

Updated Dec 1, 2022
TypeScript

furkanmtorun / gnomad_python_api

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🧬 gnomAD Python API is used to obtain data from gnomAD (genome aggregation database).

genomics variants bioinformatics-databases genomics-data gnomad gnomad-python-api genome-aggregation-database

Updated Dec 9, 2021
Python

KalinNonchev / gnomAD_DB

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This package scales the huge gnomAD files to a SQLite database, which is easy and fast to query. It extracts from a gnomAD vcf the minor allele frequency for each variant.

database annotation genetics variant-analysis rare-variant-analysis gnomad

Updated Oct 25, 2022
Python

mt190502 / bash-bin

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Some BASH Projects

dotfiles bash jukebox debian gnome sway bash-script efi bash-scripting simple-project dotfiles-linux efistub gnomad sway-config gnome-wallpaper systemdboot

Updated Jun 23, 2022
Shell

nf-core / pgdb

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The ProteoGenomics database generation workflow creates different protein databases for ProteoGenomics data analysis.

workflow pipeline nextflow proteomics cosmic proteogenomics nf-core protein-databases gnomad pypgatk

Updated Oct 4, 2022
Nextflow

kopalgarg / gnomAD_gene_model

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shiny web-app

r genetics shiny variant-annotation gnomad

Updated Jun 24, 2021
R

daynefiler / gnomadR

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R package to access gnomAD API (under development)

api r api-wrapper gnomad

Updated Feb 6, 2022
R

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