sequence-alignment

See https://github.com/biopython/biopython/blob/master/Bio/SeqFeature.py and __add__, need to do the same specifically for integer offsets.

Workaround feature + (-5) instead of feature - 5, see https://twitter.com/tomeraltman/status/1473764959347638273

You can get aligner to work on windows command line by inserting the following lines into aligner.ccp
after line 8: #include <queue>

#ifdef _WIN32
#include "getopt.h"
#endif

#include "edlib.h"

Then adding getopt.h file. The one I used is here: https://raw.githubusercontent.com/skandhurkat/Getopt-for-Visual-Studio/master/getopt.h although that's likely not the origin of the fi

It isn't obvious to users that a search result URL is stable (until deleted).

To make this more obvious, we should add an explicit
Share results section, with a "Copy URL to clipboard" text that does what it says

the brca1.fasta and murphy.tree are so commonly used, they should just be included. These files are currently under tests/data.

We'll need to standardize the CPU / GPU version of needleman-wunsch.

• Make sure that batching can be handled on the CPU (a hacked version is ok, will need to make sure that dimensions aren't an issue)
• Make sure that the appropriate flags checking for devices are in place.