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Pull requests: biopython/biopython

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Pull requests list

raise and error if an invalid Newick unquoted label name is found while parsing the tree
#4139 opened Oct 20, 2022 by amatria Loading…
3 tasks done
1
3
switch to instance class contructor where usefull
#4120 opened Oct 7, 2022 by jan-glx Loading…
2 of 3 tasks
3
[pre-commit.ci] autoupdate
#4112 opened Oct 3, 2022 by pre-commit-ci bot Loading…
3
Remove call to float
#4108 opened Sep 29, 2022 by mdehoon Loading…
3 tasks done
Support multi-line qualifier values
#4073 opened Sep 7, 2022 by v-raja Loading…
3 tasks done
5
GitHub Workflows security hardening
#4062 opened Aug 29, 2022 by sashashura Loading…
2 of 3 tasks
@JoaoRodrigues
2
List data folders under setup.py's packages list
#4051 opened Aug 23, 2022 by peterjc Loading…
3 tasks done
1
Supplement pdb-header-list information
#4044 opened Aug 19, 2022 by wk989898 Loading…
3 tasks done
2
Converts %s formatting to f-strings in Bio.PDB.PDBList
#4036 opened Aug 13, 2022 by sean-workman Loading…
2 of 3 tasks
1
Updates Bio.PDB.PSEA to run third-party tool in temporary directory
#4034 opened Aug 12, 2022 by sean-workman Loading…
2 of 3 tasks
1
1
Updates argument handling in PDBList
#4032 opened Aug 11, 2022 by sean-workman Loading…
2 of 3 tasks
24
Pre-commit hook to prevent addition of assert in the production code
#4017 opened Aug 2, 2022 by JulianMaurin Loading…
3 tasks done
6
Improve PDB server interoperability
#4012 opened Jul 30, 2022 by JulianMaurin Loading…
3 tasks done
1
58
Extracts information about the relative orientation of chains in oligomeric structures
#3984 opened Jul 15, 2022 by sachdved Loading…
@JoaoRodrigues
4
Drop pre-commit.ci badge & configuration
#3967 opened Jun 22, 2022 by peterjc Loading…
3 tasks done
1
10
Fix calculating height of clades when building UPGMA tree version 2
#3951 opened Jun 14, 2022 by fabianegli Loading…
3 tasks done
[WIP] improve error messages for invalid formats
#3926 opened May 11, 2022 by fabianegli Loading…
3 tasks done
22
Do not use assert outside of testing code
#3925 opened May 11, 2022 by whosayn Loading…
3 tasks done
14
Added support for LEON compressed fasta/fastq files.
#3919 opened May 2, 2022 by jdvne Loading…
3 tasks done
1
Remove newlines in qualifier values when parsing SnapGene files
#3913 opened Apr 28, 2022 by gouttegd Loading…
3 tasks done
1
21
Handle line breaks in GenBank writer
#3911 opened Apr 25, 2022 by erik-whiting Loading…
3 tasks done
1
18
Add inline and Tutorial documentation for internal_coords; change edr…
#3898 opened Apr 6, 2022 by rob-miller Loading…
3 tasks done
@JoaoRodrigues
15
Fix broken reference in selected_child when copying a DisorderedAtom
#3897 opened Apr 6, 2022 by Bartvelp Loading…
3 tasks done
1
2
Supporting LINK and SSBOND lines from PDB files
#3858 opened Feb 9, 2022 by markf94 Loading…
3 tasks done
9
Support PDB charges in Atom class
#3857 opened Feb 9, 2022 by markf94 Loading…
3 tasks done
1
6
ProTip! Exclude everything labeled bug with -label:bug.