bioinfomatics

Star

Here are 38 public repositories matching this topic...

tanghaibao / goatools

Star

Python library to handle Gene Ontology (GO) terms

genomics gene-ontology bioinfomatics gene-set-enrichment sidak fdr goslim-terms fisher-tests fdr-benjamini holm-sidak

Updated Apr 3, 2022
Python

seqan / seqan

Star

SeqAn's official repository.

high-performance cpp14 indexing simd alignment bwt fasta blast fastq-format bioinfomatics suffixarray sequence-alignments seqan htslib sam-bam

Updated May 22, 2022
C++

zakandrewking / escher

Star

Build, share, and embed visualizations of metabolic pathways.

visualization javascript python biology d3js bioinfomatics escher

Updated Apr 9, 2022
JavaScript

veg / hyphy

Star

HyPhy: Hypothesis testing using Phylogenies

science c-plus-plus phylogenetics bioinfomatics

Updated May 26, 2022
HyPhy

deeptools / pyBigWig

Star

A python extension for quick access to bigWig and bigBed files

bigwig bigbed bioinfomatics

Updated Nov 25, 2021
C

nahmedraja / GASAL2

Star

gpu-acceleration bioinfomatics sequence-alignment cuda-library

Updated Dec 19, 2019
C++

ShixiangWang / geek-r-tutorial

Star

极客R：数据分析之道

r bioinfomatics r-bookdown r-book r-tutorial geek-r

Updated Aug 12, 2020
TeX

ihmpdcc / osdf-schemas

Star

The OSDF JSON-Schema files for the HMP project

webservice json research json-schema research-project research-data-repository bioinfomatics osdf-schemas

Updated Aug 26, 2021
Shell

chamkank / Python-DNA-Tool

Star

Scripts for DNA translation, RNA transcription, GC content calculations, percent composition & ATCG base count calculations in Python

bioinfomatics dna-translation

Updated Jun 20, 2015
Python

sapporo-wes / sapporo-service

Star

A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specification.

workflow bioinfomatics workflow-management-system ga4gh-wes

Updated May 10, 2022
Python

xihaoli / MACIE

Star

Multi-dimensional Annotation Class Integrative Estimation

genetics bioinfomatics functional-annotation integrative-scores

Updated Mar 7, 2022
Python

chungongyu / siga

Star

SIGA is a de novo genome assembler compatible with the SGA file format

genome assembler bioinfomatics siga

Updated Aug 31, 2021
C++

YannDubs / FourRussiansRNA

Star

Faster algorithms for RNA-folding using the Four-Russians method

efficient complexity bioinfomatics rna-folding

Updated Apr 6, 2017
C++

kyu999 / ProtParamJS

Star

A tool to analyze proteins

protein bioinfomatics protparam

Updated Oct 30, 2020
JavaScript

gkoulouras / easyFRAP-web

Star

A web tool for the analysis of Fluorescence Recovery After Photobleaching (FRAP) data.

web-application bioinformatics-pipeline vb-net fluorescence bioinfomatics bioinformatics-analysis fluorescence-microscopy-imaging frap frap-analysis frap-experiment fluorescence-recovery easyfrap-web

Updated May 8, 2019
JavaScript

anand84471 / PythonForBioinformatics

Star

This repository will be helpful to start using python for your Bioinformatics projects.

python bioinfomatics bioinformatics-scripts

Updated Apr 27, 2021
Python

jdreyf / fat-exosome-microrna

Star

Data/code/output for "Adipose-derived circulating miRNAs regulate gene expression in other tissues" by Thomou, Mori, Dreyfuss, et al. (2017)

r bioinfomatics

Updated Feb 17, 2017
R

waterml / blast2hgt

Star

Determine horizontal transfers based on sequence similarity

database bioinfomatics genome-analysis

Updated May 25, 2018
Perl

chris-rands / CrUtils

Star

Various (mostly bioinformatic) utility scripts

python genomics bioinfomatics

Updated Jun 28, 2019
Python

dmourasi / Filogenia-em-R-para-iniciantes

Star

Este tutorial foi criado por Olivier De Clerk (Ugent). Atualizado e traduzido por Daniel Moura

r biology phylogenetic-trees phylogenetics bioinfomatics

Updated Feb 13, 2021

hkrkizum / BashScript

Star

Scripts for RNA-seq, Windows subsystem on Linux

bash ngs bioinfomatics

Updated Dec 3, 2019
Shell

masikol / preprocess16S

Star

Preprocessing for 16S rDNA Illumina reads

metagenomics preprocessing bioinfomatics 16s merging cross-talks

Updated May 6, 2021
Python

gibarsin / bioinformatics-tp1

Star

Trabajo Práctico para Introducción a Bioinformática en ITBA

dna protein genbank fasta blast bioinfomatics

Updated Jun 12, 2018
Java

ekaminuma / BARCODE_STAT

Star

DNA BARCODE Statistics : Number of GBIF BOLD entries 2014-11-27

matlab bioinfomatics dna-sequences dna-barcode

Updated Sep 9, 2015
MATLAB

ekaminuma / GTASSIST

Star

GTASSIST: Objective evaluation measures of genetic marker selection in SNP genotyping (2008-02-05)

matlab snp bioinfomatics genotypes taqman

Updated Sep 9, 2015
MATLAB

AlkaffAhamed / Modified-K-Means-on-PDB-File

Star

An implementation of modified K-Means clustering on Biological Data (Proteins).

machine-learning bioinformatics r protein-structure k-means bioinfomatics bioinformatics-scripts structural-analysis k-means-clustering bioinformatics-tool

Updated Apr 16, 2020
R

KutzO / ComPy

Star

A python based tool to compare .bam and .vcf data using a SQLite3 datanbase

quality-control overview bioinfomatics ngs-analysis database-comparison

Updated Nov 10, 2021
Python

lucianogiaco / lianne

Star

Management flow using PBS system to analyze sequencing data from Illumina Novaseq6000

coverage variant-calling bioinfomatics variant-analysis

Updated Apr 1, 2022
R

arupgsh / NGS_PreQC

Star

python3 bioinfomatics illumina-sequencing flowcell

Updated May 24, 2021
Python

sykhro / cancol-analysis

Sponsor

Star

bioinfomatics pathway-analysis notebook-jupyter colorectal-cancer

Updated Oct 4, 2021
Jupyter Notebook

Improve this page

Add a description, image, and links to the bioinfomatics topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the bioinfomatics topic, visit your repo's landing page and select "manage topics."

Learn more