biocontainers

Here are 11 public repositories matching this topic...

CSBiology / BioFSharp

Open source bioinformatics and computational biology toolbox written in F#.

docker bioinformatics fsharp biology datascience biostatistics amino-acids biocontainers bioinformatics-containers nucleotides dataprocessing sequence-analysis

Updated Dec 16, 2022
F#

BioContainers / specs

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BioContainers specifications

docker bioinformatics specifications rkt biocontainers-specification biocontainers bioinformatics-containers biocontainers-architecture bioinformatics-analysis

Updated Nov 3, 2022

bigbio / nf-workflows

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Repository of Nextflow+BioContainers workflows

workflow bioinformatics nextflow bioinformatics-pipeline proteomics biocontainers

Updated Sep 28, 2021
Nextflow

ypriverol / containers-rules-manuscript

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Recommendations to contenarized your bioinformatics software

docker conda rkt bioconda biocontainers

Updated May 30, 2018
Shell

BioContainers / edu

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BioContainers Documentation.

documentation containers travis readthedocs bioconda biocontainers documentation-code

Updated Nov 9, 2022
JavaScript

BioContainers / biocontainers-backend

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Python backend for Biocontainers (Flask + MongoDB)

rest-api restful-api ga4gh ga4gh-server biocontainers

Updated Oct 20, 2022
Python

LUMC / hutspot

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Multisample DNAseq variant calling pipeline for use in diagnostics

bioinformatics snakemake singularity biocontainers snakemake-workflows ngs-analysis ngs-pipeline

Updated Jan 12, 2022
Python

sk-sahu / PGRB

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Practical Guide to Reproducibility in Bioinformatics (Work In Progress)

docker bioinformatics reproducible-research jupyter-notebook conda rmarkdown reproducible-science bioconda reproducibility domain-specific-language biocontainers workflow-automation conda-environment reproducible-analysis

Updated Oct 15, 2020
Nextflow

BioContainers / local-containers

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This repository contains all the containers that can't be deploy in public registries or need customs settings

docker-image biocontainers private-cotainers

Updated Oct 13, 2016
Shell

thanhleviet / ratt

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biocontainers based docker for Rapid Annotation Transfer Tool

annotations biocontainers

Updated May 17, 2017

ypriverol / ThermoRawFileParser

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Thermo RAW file parser and converter

bioinformatics containers proteomics mass-spectrometry biocontainers

Updated Dec 9, 2019
C#

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