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  • Genedata AG
  • Basel, Switzerland / Freiburg, Germany

Achievements

Achievement: QuickdrawAchievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: Starstruckx2Achievement: Pull Sharkx4
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Achievements

Achievement: QuickdrawAchievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: Starstruckx2Achievement: Pull Sharkx4
BetaSend feedback

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@maxplanck-ie
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Pinned

  1. deeptools/deepTools Public

    Tools to process and analyze deep sequencing data.

    Python 524 175

  2. ChromosomeMappings Public

    This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.

    205 57

  3. deeptools/pyBigWig Public

    A python extension for quick access to bigWig and bigBed files

    C 152 39

  4. libBigWig Public

    A C library for handling bigWig files

    C 62 25

  5. MethylDackel Public

    A (mostly) universal methylation extractor for BS-seq experiments.

    C 118 35

  6. bison Public

    Bisulfite alignment on nodes of a cluster

    C 8 1

1,438 contributions in the last year

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Contribution activity

August 2022

Created 11 commits in 4 repositories

Created a pull request in conda-forge/conda-forge-pinning-feedstock that received 6 comments

Update pinnings on R-base

Checklist Used a personal fork of the feedstock to propose changes Bumped the build number (if the version is unchanged) Reset the build number…

+10 −1 • 6 comments
Opened 2 other pull requests in 2 repositories
bioconda/bioconda-recipes 1 merged
bioconda/bioconda-utils 1 merged
Reviewed 42 pull requests in 3 repositories
bioconda/bioconda-recipes 25 pull requests
conda-forge/r-base-feedstock 1 pull request
bioconda/bioconda-utils 1 pull request

Created an issue in tolkit/fasta_windows that received 3 comments

Compilation issue

While rebuilding fasta_windows on Bioconda I ran into the following compilation error: error[E0599]: no method named `progress_chars` found for enu…

3 comments
Opened 2 other issues in 2 repositories
brentp/mosdepth 1 open
EI-CoreBioinformatics/portcullis 1 open

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