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  1. scgen Public

    Single cell perturbation prediction

    Python 174 43

  2. scarches Public

    Reference mapping for single-cell genomics

    Jupyter Notebook 209 34

  3. Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

    Jupyter Notebook 917 364

  4. scvelo Public

    RNA Velocity generalized through dynamical modeling

    Python 282 80

  5. This project is work in progress! https://www.sc-best-practices.org

    Jupyter Notebook 48 4

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