genetics

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Here are 667 public repositories matching this topic...

hail-is / hail

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Scalable genomic data analysis.

python bioinformatics gwas scala spark genomics genetics vcf software hail

Updated Oct 25, 2022
Python

trekhleb / self-parking-car-evolution

Sponsor

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🧬 Training the car to do self-parking using a genetic algorithm

threejs genetics genetic-algorithm evolutionary-algorithms self-driving-car cannonjs three-js evolutionary-algorithm cannon-js

Updated Oct 21, 2022
TypeScript

MareesAT / GWA_tutorial

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A comprehensive tutorial about GWAS and PRS

unix bioinformatics gwas r genomics genetics plink prs population-structure qc population-stratification

Updated Jan 3, 2020

wilkox / gggenes

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➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2

ggplot2 r genetics

Updated Mar 24, 2022
R

intermine / intermine

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A powerful open source data warehouse system

Updated Sep 27, 2022
Java

theislab / cellrank

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CellRank for directed single-cell fate mapping

data-science machine-learning bioinformatics genetics trajectory-generation markov-chains manifold-learning single-cell-genomics single-cell-rna-seq cell-fate-transitions fuzzy-clustering-analyses rna-velocity cell-fate-determination

Updated Oct 12, 2022
Python

tskit-dev / msprime

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Simulate genealogical trees and genomic sequence data using population genetic models

python genomics genetics simulation trees coalescent tskit msprime

Updated Oct 21, 2022
Python

DecodeGenetics / graphtyper

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Population-scale genotyping using pangenome graphs

bioinformatics graph genetics variants genotype decode-genetics

Updated Sep 21, 2022
C++

pystatgen / sgkit

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Statistical genetics toolkit

gwas genetics pydata popgen statistical-genetics statgen

Updated Oct 25, 2022
Python

zhanxw / rvtests

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Rare variant test software for next generation sequencing data

c-plus-plus gwas kernel genetics ngs next-generation-sequencing variants meta-analysis genotype umich skat association-analysis rare-variant vcf-files

Updated Jan 26, 2022
C++

lgmgeo / AnnotSV

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Annotation and Ranking of Structural Variation

annotation genetics ngs ranking cnv sv priorization

Updated Oct 18, 2022
Tcl

apriha / lineage

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tools for genetic genealogy and the analysis of consumer DNA test results

bioinformatics snps genetics genealogy dna ancestry genes genotype chromosomes

Updated Sep 26, 2022
Python

molgenis / molgenis

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MOLGENIS - for scientific data: management, exploration, integration and analysis.

javascript java bioinformatics genetics catalogue freemarker biobank lifescience molgenis

Updated Sep 5, 2022
Java

cmap / cmapPy

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Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools

gene genetics pandas gct gctx grp

Updated Jul 19, 2022
Python

mentatpsi / OSGenome

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An Open Source Web Application for Genetic Data (SNPs) using 23AndMe and Data Crawling Technologies

python flask snps genome genetics kendo snpedia raw-data 23andme genetic-data data-crawling

Updated Oct 8, 2022
Python

ODiogoSilva / TriFusion

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Streamlining phylogenomic data gathering, processing and visualization

visualization python gui genetics kivy phylogenetics orthologues phylogenomic

Updated Sep 26, 2018
Python

RCollins13 / HumanIdiogramLibrary

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Resource of human chromosome schematics & images

genomics genetics resources data-visualization genomics-visualization

Updated Dec 17, 2020

plashchynski / awesome-genetics

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A curated list of awesome bioinformatics software.

bioinformatics genomics genetics health dna ancestry snpedia 23andme geneology consumer-dna-test

Updated May 13, 2022

labsquare / cutevariant

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A standalone and free application to explore genetics variations from VCF file

gui genetics python3 vcf pyside2 variant-call-format

Updated Sep 27, 2022
Python

hardingnj / xpclr

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Code to compute the XP-CLR statistic to infer natural selection

bioinformatics genetics popgen selection

Updated Jun 13, 2022
Python

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