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dna-barcoding

Here are 7 public repositories matching this topic...

poly

TimothyStiles / poly

Sponsor

A Go package for engineering organisms.

bioinformatics synthetic-biology computational-biology dna genbank fasta molecular-biology synbio bioengineering primer-design golden-gate dna-barcode plasmids dna-barcoding codon-optimizer genetic-engineering engineering-organisms sequence-hashing

Updated Sep 29, 2022
Go

CNuge / coil

An R package for pre-processing and error evaluation of COI-5P barcode data

bioinformatics r hidden-markov-model dna-sequences denoising dna-barcoding

Updated Apr 19, 2022
R

CNuge / debar

A sequence-by-sequence denoiser for COI DNA barcode and metabarcode data

machine-learning bioinformatics r hidden-markov-model denoising dna-sequencing dna-barcoding

Updated Apr 19, 2022
R

Jonathan-Edwall / Development-of-a-Dna-barcode-for-species-identification-of-tuna

Repository containing a python script for barcode gap plotting, as well as an example input-file for the script.

mega dna-barcode dna-barcoding

Updated Jun 2, 2022
Python

rdmpage / dimacs-dnabarcode-challenge

Files from DIMACS 2007 DNA barcoding challenge

dna k-mer alignment-free dna-barcoding

Updated Sep 21, 2022
C

HiddenDiversity

parsons463 / HiddenDiversity

This repository contains data and code from the manuscript, "Analysis of biodiversity data suggests that species are hidden in predictable places".

machine-learning taxonomy conservation biodiversity-informatics mammals species-delimitation dna-barcoding cryptic-species

Updated Mar 10, 2022
R

jphill01 / HACSim.R

Iterative extrapolation of species haplotype accumulation curves for genetic diversity assessment.

r dna-barcoding haplotype-accumulation-curves

Updated Sep 21, 2022
R

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