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splice-junctions

Here are 7 public repositories matching this topic...

mozack / abra2

ABRA2

ngs dna rna indels abra splice-junctions realigner

Updated Oct 11, 2021
Java

EI-CoreBioinformatics / portcullis

Splice junction analysis and filtering from BAM files

bam-files filter portcullis junction splice-junctions

Updated Mar 31, 2022
C++

guigolab / ipsa-nf

Integrative Pipeline for Splicing Analyses (IPSA) in Nextflow

bioinformatics rna-seq pipeline genomics nextflow ngs splicing-quantification splicing-event crg guigo splice-junctions splicing-analyses

Updated Jul 19, 2019
Perl

sivkri / splicing-variants-QoRTS-and-JunctionSeq

calculate splice variants based on QorTS and Junctionseq algorithmn

spliced-alignment splice-junctions splice-variants

Updated Nov 5, 2021
R

Moeinh77 / DNA-sequene-classificaiton

Classification of Splice Junction sites using Neural Networks with Python and Keras

deep-learning neural-networks convolutional-neural-networks dna-sequences splice-junctions

Updated Dec 6, 2021
Jupyter Notebook

lcscs12345 / riboss

Comparison of the ability of open reading frames to recruit ribosomes within individual transcripts

rna-seq translation ribosome-profiling isoform-quantification ribosome splice-junctions uorfs ribo-seq

Updated May 21, 2021
Python

dieterich-lab / primex

primer-design primer3 splice-junctions

Updated Jan 25, 2018
R

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