structural-biology

Protein Graph Library

Addon and nodes for working with structural biology and molecular data in Blender.

A comprehensive library for computational molecular biology

A dependency-free cross-platform swiss army knife for PDB files.

An all-atom protein structure dataset for machine learning.

macromolecular crystallography library and utilities

Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm

Python macromolecular parsing (with .pdb/.cif/.mmtf parsing and production)

Predicting protein structure through sequence modeling

A Python framework for structural systems biology

C-library for calculating Solvent Accessible Surface Areas

Official code repository for EquiFold

Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM)

A Julia package to read, write and manipulate macromolecular structures (particularly proteins)

PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.

The Biochemical Algorithms Library

VSCode Extension for interactively visualising protein structure data in the editor

The Integrative Modeling Platform

A framework for rapidly mining structural information from the Protein Data Bank

Control PyMOL sessions via IPython