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python bioinformatics rna-seq genomics ngs chip-seq

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python bioinformatics algorithm pipeline tool clustering ngs sequencing example-data hi-c dbscan 3d-genome chia-pet chromatin-interaction stripes hichip chromatin-loops chromatin-stripes loops-calling trac-looping

bioinformatics rna-seq snakemake pipeline reproducible-research ngs bioinformatics-pipeline chip-seq atac-seq workflows fastq sra

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